miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|124227250|gb|EE146358.1|EE146358 CGATCATGTCGTCGGAATTGTTAACCGGTATCCTGGGCAAGCGTTACAAGCTCCAATCGAGCGAAAAATTCGACGAATAT
ATGAAAGCCTTAGGCGTCGGCATGGTGACGCGTAAAATGGGCAGCACCGTCAGTCCCGTCGTCGAGCTGACAGAGAAGGA
CGGGATGTACACCCTAAAGACGACCAGCCCCTTCAAAAACACCGAAATAAAGTTCAAGCTTGGCGAGGAGTTCGATGAGG
AGACTGCGGACGGCAGGAAGGTGAAGAGCGTCTGTACTTTGGAGGGTAACAAACTTATACAGGAACAAAAGGGTGAAAAG
AACACCACGATCGAGAGGGAATTCACGCCCACGGAGATGACTGCGATCATGAAGGTCGATGACATAGTCTGCACAAGGGT
ATACAAGCTTCAGGAATAGGGGTCCAGTTACCGAAGTCTTAAGGAGTGCACAACCTTACACAGATGCTTCTAAAAGCGTT
CTCGGAACACAATATAAATCATCCTTTGAAATCTCTACTTGAGCGTAAATAAAATATATATTATAATAAGCTACATGTTG
TAAAAAATTCATGTCGAAGCGTAACTTAAAGATTGCAGAATATATGTTTTTTTTTTATGGAATTTAAACTCGCATTTTTG
ATACATGTACGCATCCGTGAAGTGGATATATTGAATGGCAACCAAAGCATAAATTAGCCTTCTGTTGGGTGCACATTTTC
TATTTATGTATATTACGTATTACGTAATGTTGAACGAATACTGGCCGCGAAATTTGTTCCCCGTACACCATTTGCTGAAT
ATCCTTTACGAAAGGTTGGTTTTTTTCTACGAATAAAAATGGACTAGG




Most similar to sp|P41509|FABPM_LOCMI

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P41509|FABPM_LOCMI Fatty acid-binding protein, muscle OS=Locusta
           migratoria PE=1 SV=2
          Length = 134

 Score =  132 bits (331), Expect = 4e-30
 Identities = 68/128 (53%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
 Frame = +3

Query: 36  GKRYKLQSSEKFDEYMKALGVGMVTRKMGSTVSPVVELTEKDG-MYTLKTTSPFKNTEIK 212
           G +YKL S   F+EYMKA+GVG + RK G  +SPV+EL   DG  + L + +  KNTE  
Sbjct: 7   GIKYKLDSQTNFEEYMKAIGVGAIERKAGLALSPVIELEVLDGDKFKLTSKTAIKNTEFT 66

Query: 213 FKLGEEFDEETADGRKVKSVCTLEG-NKLIQEQKGEKNTTIEREFTPTEMTAIMKVDDIV 389
           FKLGEEFDE+T DGRKVKS+ T +G NKL+ EQKG+  T I REF+  +    +K+ D+V
Sbjct: 67  FKLGEEFDEDTLDGRKVKSIITQDGPNKLVHEQKGDHPTIIIREFSKEQCVITIKLGDLV 126

Query: 390 CTRVYKLQ 413
            TR+YK Q
Sbjct: 127 ATRIYKAQ 134